structure nameSTRUCTURE OF AN ARGONAUTE COMPLEXED WITH GUIDE DNA AND TARGET RNA DUPLEX CONTAINING TWO MISMATCHES.
(ARGONAUTE)
referencePatel et al. Nature 461 754 2009
sourceTHERMUS THERMOPHILUS
experimentX-ray (resolution=3.10, R-factor=?)
structural superfamilyRibonuclease H-like;
multimeric complexes3hk2_AB 3hvr_AB
reference complex4n41_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYMWRINHRNRF

Estimated binding specificities ?

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# IC=4.707 IC/col=0.362 n_of_columns=13 specificity:   
A |   0   0  31  24  24  16  74  24  24  24  24  24   0
C |   0   0  21  24  24  16   8  24  24  24  24  24   0
G |   0  96  21  24  24  19   7  24  24  24  24  24   0
T |  96   0  23  24  24  45   7  24  24  24  24  24  96
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updated Sat Aug 2 04:01:42 2025