interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A REX-FAMILY REPRESSOR R90D MUTANT/DNA COMPLEX FROM THERMUS AQUATICUS
(Redox-sensing transcriptional repressor rex)
referenceMcLaughlin et al. Mol.Cell 38 563 2010
sourceThermus thermophilus HB27
experimentX-ray (resolution=2.49, R-factor=0.254)
structural superfamilyNADP-binding Rossmann-fold domains;"Winged helix" DNA-binding domain;
sequence familyCoA binding domain; Putative DNAbinding protein Nterminu;
multimeric complexes3ikt_AB 3il2_AB
reference complex3ikt_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureFRKR

Estimated binding specificities ?

contactlogo
# IC=3.142 IC/col=0.524 n_of_columns=6 specificity:   
A |   0  24   0  24  13  13
C |  96  24  96  24  13  54
G |   0  24   0  24  57  13
T |   0  24   0  24  13  16
scan!

home
updated Thu Sep 12 17:20:58 2024