interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF SOPB(155-272)-18MER COMPLEX, P21 FORM
(Protein sopB)
reference'Nucleic 38 4514 2010
sourceEscherichia coli
experimentX-ray (resolution=2.98, R-factor=0.213)
structural superfamilyKorB DNA-binding domain-like;
multimeric complexes3mkz_AN
redundant complexes3mkw_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSSRKIRR

Estimated binding specificities ?

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# IC=8.004 IC/col=1.001 n_of_columns=8 specificity:   
A |   0   0  11   0  69   0   0  67
C |   0   0   9   0   9  96  96   9
G |   0  96  67  96   9   0   0   9
T |  96   0   9   0   9   0   0  11
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Dendrogram of similar interfaces ?

matrix format

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updated Tue Dec 19 07:50:24 2023