3oqn_A : 3D-footprint complex

structure name	STRUCTURE OF CCPA-HPR-SER46-P-GNTR-DOWN CRE (CATABOLITE CONTROL PROTEIN A)
reference	Schumacher et al. 'Nucleic 39 2931 2011
source	BACILLUS SUBTILIS
experiment	X-ray (resolution=3.30, R-factor=0.222)
structural superfamily	Periplasmic binding protein-like I;lambda repressor-like DNA-binding domains;
sequence family	Bacterial regulatory proteins, lacI fami; Periplasmic binding proteins and sugar b;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3oqn_A interface=15,16,17,20,21,28,52,55,56, mnitiydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk
interface signature	SMASRNALA

readout + contact

# IC=6.672 IC/col=0.834 n_of_columns=8

A |   0   0  11  24  69  11   0   0
C |   0   0   9  24   9  67  96   0
G |   0  96  67  24   9   9   0  96
T |  96   0   9  24   9   9   0   0

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updated Mon Dec 16 21:38:24 2024