3oqo_C : 3D-footprint complex

structure name	CCPA-HPR-SER46P-SYN CRE (CATABOLITE CONTROL PROTEIN A)
reference	schumacher et al. 'Nucleic 39 2931 2011
source	BACILLUS SUBTILIS
experiment	X-ray (resolution=2.97, R-factor=0.212)
structural superfamily	Periplasmic binding protein-like I;lambda repressor-like DNA-binding domains;
sequence family	Bacterial regulatory proteins, lacI fami; Periplasmic binding proteins and sugar b;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3oqo_C interface=5,15,16,17,20,21,28,52,55,56, mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk
interface signature	ISMASRNALA

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# IC=7.150 IC/col=0.894 n_of_columns=8

A |   0   0  57  51  90   0   0  12
C |   0   0  15  14   0   0  96  12
G |   0  96  12  19   0  96   0  57
T |  96   0  12  12   6   0   0  15

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updated Mon Dec 16 21:38:38 2024