3wts_AC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA
reference	Shiina et al. J.Mol.Biol. 427 1655 2015
source	MUS MUSCULUS / HOMO SAPIENS
experiment	X-ray (resolution=2.35, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3wts_A interface=22,84,112,113,116,119, mgelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR > 3wts_C interface=70,73,76,77, pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk
interface signature	RRVDRR/KRRY

Estimated binding specificities ?

readout + contact

# IC=12.823 IC/col=1.069 n_of_columns=12

specificity:

A |  89   0   0  89   0   0   0   0   0   6   6  12
C |   0   0   0   1   0   0   0   0   0  64  12   6
G |   6  96  96   6   0  96   0  96  96  14  12   6
T |   1   0   0   0  96   0  96   0   0  12  66  72

scan!

home
updated Fri Dec 13 18:34:11 2024