3wtt_AC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF PHOSPHORYLATED ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA
reference	Shiina et al. J.Mol.Biol. 427 1655 2015
source	MUS MUSCULUS / HOMO SAPIENS
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	p53-like transcription factors;"Winged helix" DNA-binding domain;
reference complex	3wts_A 4l18_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3wtt_A interface=21,83,111,112,115,118, gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRr > 3wtt_C interface=69,70,73,76,77, pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk
interface signature	RRVDRR/EKRRY

Estimated binding specificities ?

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# IC=12.912 IC/col=1.076 n_of_columns=12

specificity:

A |  56  56   8   0   0  96   0  96   0   0   0   0
C |  16  16  16  96  96   0  96   0   0  96  96   0
G |   8   8  64   0   0   0   0   0   0   0   0   0
T |  16  16   8   0   0   0   0   0  96   0   0  96

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updated Mon Sep 9 21:01:48 2024