interface graph thumbnail
legend  pdf

structure namePROTELOMERASE TELA/DNA HAIRPIN PRODUCT/VANADATE COMPLEX
(PROTELOMERASE)
referenceAihara et al. 'Plos 11 e1001472 2013
sourceAGROBACTERIUM TUMEFACIENS
experimentX-ray (resolution=2.20, R-factor=0.196)
structural superfamilyDNA breaking-rejoining enzymes;
redundant complexes4dwp_A 4e0j_A 4e0p_A 4e0y_A 4e0z_A 4e10_A 4f41_A 4f43_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureARTTISYTKYRKKKISRLRT

Estimated binding specificities ?

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# IC=8.764 IC/col=0.974 n_of_columns=9 specificity:   
A |  96   0  89   0   0  14   9   9  78
C |   0   0   1   7   6   0   6   6   6
G |   0   0   6   0   0  82   6   6   6
T |   0  96   0  89  90   0  75  75   6
scan!

Dendrogram of similar interfaces ?

matrix format

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updated Sat Jan 10 06:57:11 2026