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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Mon Sep 9 22:08:33 2024

structure name	STRUCTURE OF U. MAYDIS REPLICATION PROTEIN A BOUND TO SSDNA
reference	Pavletich et al. 'To ? ? ?
source	USTILAGO MAYDIS
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	Nucleic acid-binding proteins;
reference complex	4gnx_A 4gnx_B 4gnx_Z
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4gnx_A interface= mekptplinssmlgqyvgqtvrivgkvhkvtgntllmqtsdlgnveiamtpdsdvssstfvevtgkvsdagssfqanqirefttvdvdltlvenvvqisaafpnlfsd > 4gnx_Z interface=27,29,38,55,56,78,83,86,158,160,176,178,203,207,213,215,216,256,258,260,279,280,288,289,291,294,297,306,332,334,336,338,347,351,353,398,400,405,407, iypieglspyqnrwtikarvtsksdiRhWsnqrgegkLfsvnllddsgeikatgFNdavdrfypllqenhvyliskaRvniaKkqFsnlqneyeitfensteieectdatdvpevkyefvrinelesveanqqcdvigildsygelseivskasqrpVqKreltlvdqgnrsvklTlWgktaetfptnagvdekpvlafkgvKvgdFggrslSmFSsstmlinpditeshvlrgwydndgahaqfqpytngggagAnMaErrtivqvkdenlgmsekpDYfnvratvVYiKqeNlyYtacasegcNkkvnldhennwrcekcdrsyatpeyRyIlStNvadatgqmWlsgFnEdatqligmsagelhklreesesefsaalhraanrmymfncrakmDtFndtaRvRytisraapvdfakagmelvdairaym