interface graph thumbnail
legend  pdf

structure nameINTERMOLECULAR RECOGNITION REVEALED BY THE COMPLEX STRUCTURE OF HUMAN CLOCK-BMAL1 BASIC HELIX-LOOP-HELIX DOMAINS WITH E-BOX DNA
referenceSu et al. 'Cell 23 213 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex4h10_A 4h10_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHSIERR/RNERR

Estimated binding specificities ?

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# IC=6.338 IC/col=0.905 n_of_columns=7 specificity:   
A |   0  73   7   7   7   0  96
C |  96   9  75   7   7   0   0
G |   0   7   7  73   7  96   0
T |   0   7   7   9  75   0   0
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updated Mon Jan 5 09:23:18 2026