4l18_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 3)
reference	Leukemia 28 2040 2014
source	MUS MUSCULUS / HOMO SAPIENS
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4l18_A interface=28,90,118,119,122,125, evladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRpgslsfserlseleqlr > 4l18_B interface=56,59,62,63, gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda
interface signature	RRVDRR/KRRY

Estimated binding specificities ?

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# IC=11.916 IC/col=0.993 n_of_columns=12

specificity:

A |  72   0   0  87   0   0   0   0   0  24   8   8
C |   8   0   0   9   0   0   0   0   0  24  11   8
G |   8  96  96   0   0  96   0  96  96  24   8   8
T |   8   0   0   0  96   0  96   0   0  24  69  72

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updated Fri Dec 13 20:34:42 2024