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legend  pdf

structure nameEGR1/ZIF268 ZINC FINGERS IN COMPLEX WITH FORMYLATED DNA
(Early growth response protein 1)
referenceOlanrewaju et al. 'Genes 28 2304 2014
sourceHomo sapiens
experimentX-ray (resolution=2.09, R-factor=0.200)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes1p47_AB
reference complex4x9j_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDERRSDHTRDER

Estimated binding specificities ?

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# IC=9.298 IC/col=1.033 n_of_columns=9 specificity:   
A |   9   0  11   0   0   0   0   0   9
C |   9  96   9   0   0   0   0   0   9
G |  67   0  67   0  96  96  96  96  11
T |  11   0   9  96   0   0   0   0  67
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updated Thu Sep 12 20:01:46 2024