4r2d_A : 3D-footprint complex

structure name	EGR1/ZIF268 ZINC FINGERS IN COMPLEX WITH FORMYLATED DNA (Early growth response protein 1)
reference	Olanrewaju et al. 'Genes 28 2304 2014
source	Homo sapiens
experiment	X-ray (resolution=2.09, R-factor=0.200)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4r2d_A interface=17,19,20,23,45,46,47,48,51,73,75,76,79, erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq
interface signature	RDERRSDHTRDER

Estimated binding specificities ?

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# IC=9.337 IC/col=1.037 n_of_columns=9

specificity:

A |  67   0   0   0   0  96   9   0   9
C |   9   0  96  96  96   0  69   0  67
G |  11  96   0   0   0   0   9  96   9
T |   9   0   0   0   0   0   9   0  11

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updated Tue Dec 17 00:13:13 2024