interface graph thumbnail
legend  pdf

structure nameACETATE-FREE STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GU MISMATCH
(GT mismatch-specific thymine DNA glycosylase)
referencePozharski et al. 'Nucleic 43 9541 2015
sourceHomo sapiens
experimentX-ray (resolution=1.72, R-factor=0.200)
structural superfamilyUracil-DNA glycosylase-like;
sequence familyUracil DNA glycosylase superfamily;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHHSKARCAQP

Estimated binding specificities ?

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# IC=5.849 IC/col=0.731 n_of_columns=8 specificity:   
A |   0  13  24  96  24   0   0  57
C |  96  13  24   0  24   0   0  13
G |   0  13  24   0  24  96   0  13
T |   0  57  24   0  24   0  96  13
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updated Tue Dec 17 00:40:37 2024