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structure nameSTRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GU MISMATCH IN THE PRESENCE OF EXCESS BASE
(GT mismatch-specific thymine DNA glycosylase)
referencePozharski et al. 'Nucleic 43 9541 2015
sourceHomo sapiens
experimentX-ray (resolution=1.45, R-factor=0.143)
structural superfamilyUracil-DNA glycosylase-like;
sequence familyUracil DNA glycosylase superfamily;
multimeric complexes2rba_AB 3uo7_AB 3uob_AB
redundant complexes2rba_B 3uo7_A 3uob_B 4fnc_A 4jgc_A 4xeg_A 4z3a_A 4z7b_A 4z7z_A 5cys_A 5ff8_A 5hf7_A 5jxy_A 5t2w_A 6u15_A 6u16_A 6u17_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  KT----AARGCGACQTPG----                        +-------4z47_A    
                                  +-------------1 
  --RA------RCQTNTQGTC--       +--2             +-------2dp6_A    
                               !  ! 
  ----TT--RA------------     --3  +---------------------4yig_E    
                               ! 
  ------PG------------NG       +------------------------1oe4_B    
                             

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updated Fri Sep 13 19:04:42 2024