| structure name | ICP4 DNA-BINDING DOMAIN, LACKING INTRINSICALLY DISORDERED REGION, IN COMPLEX WITH 12MER DNA DUPLEX FROM ITS OWN PROMOTER (Major viral transcription factor ICP4) |
| reference | Lockhart-Cairns et al. 'Nucleic 45 8064 2017 |
| source | Human herpesvirus 1 (strain 17) / Human herpesvirus 1 (strain 17) |
| experiment | X-ray (resolution=2.12, R-factor=0.199) |
| sequence family | Herpesvirus ICP4like protein Ntermina; |
| multimeric complexes | 5mhj_AB 5mhk_AB 5mhk_CDJ |
| redundant complexes |  5mhk_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SSRR |
Estimated binding specificities ?
| contact |  |
A | 54 0 0 54 C | 13 96 0 13 G | 13 0 96 13 T | 16 0 0 16scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ICP4 | ||
| ATCGTC | PubMed | 5mhj_A(3.59e-04), 5mhj_AB(1.37e-07) |
| TCGTC | PubMed | 5mhj_A(1.36e-04), 5mhj_AB(1.48e-04) |
| ATCGT | PubMed | 5mhj_A(1.36e-04), 5mhj_AB(2.95e-08) |
| ATCGTNNNNNCGG | PubMed | 5mhj_A(8.64e-03), 5mhj_AB(1.92e-05) |
| ATCGTCNNNN | PubMed | 5mhj_A(4.11e-03), 5mhj_AB(6.56e-06) |
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updated Fri Sep 13 20:01:03 2024