interface graph thumbnail
legend  pdf

structure nameICP4 DNA-BINDING DOMAIN IN COMPLEX WITH 19MER DNA DUPLEX FROM ITS OWN PROMOTER
referenceLockhart-Cairns et al. 'Nucleic 45 8064 2017
experimentX-ray (resolution=2.28, R-factor=0.213)
sequence familyHerpesvirus ICP4like protein Ntermina;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRSSRR

Estimated binding specificities ?

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# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |  69   9   0  67
C |   9  67   0   9
G |   9   9  96  11
T |   9  11   0   9
scan!

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updated Tue Dec 17 02:18:21 2024