| structure name | EPSTEIN-BARR VIRUS ZTA DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA (Zta transcription factor) |
| reference | Horton et al. 'Nucleic 45 2503 2017 |
| source | Epstein-Barr virus |
| experiment | X-ray (resolution=2.25, R-factor=0.261) |
| structural superfamily | Leucine zipper domain; |
| sequence family | bZIP transcription factor; |
| multimeric complexes | 2c9l_YZ 2c9n_YZ 5szx_AB 7nx5_AB |
| redundant complexes | 7nx5 |
| reference complex | 2c9l_Z |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ZEBRA | ||
| TGAGTCA | PubMed | 5szx_AB(1.18e-02) |
| TGAGCCA | PubMed | 5szx_AB(6.27e-05) |
| TGAGCAA | PubMed | 5szx_AB(3.19e-08) |
Dendrogram of similar interfaces ?
matrix format----NG--AT--STRG---- +-----5szx_B +-3 ------RA--NAAAVTSTRG L ! ! +1nwq_C ! +-----1 --RANANCATVTSTRG---- L +------4 +1gu4_B ! ! ----NC--AAAT--RT---- L ! ! +1a02_F --5 +-------2 --RANA--AAVTSTRG---- L ! +1h89_A ! RG--NC--YGATCTRG---- L +--------------2wt7_B |
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updated Tue Dec 17 02:29:07 2024