interface graph thumbnail
legend  pdf

structure nameMYCOBACTERIUM TUBERCULOSIS KSTR IN COMPLEX WITH A 18-BP DNA OPERATOR
(HTH-type transcriptional repressor KstR)
referenceTB Structural Genomics Consortium (TBSGC)
sourceMycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
experimentX-ray (resolution=2.90, R-factor=0.231)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory proteins, tetR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMRAVTY

Estimated binding specificities ?

contactlogo
# IC=4.007 IC/col=0.572 n_of_columns=7 specificity:   
A |   9   0   0  11  24  24  67
C |  69   0   0   9  24  24   9
G |   9  96   0   9  24  24  11
T |   9   0  96  67  24  24   9
scan!

home
updated Tue Dec 17 02:32:24 2024