5xpa_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 9'U10' ON THE TARGET STRAND (Uncharacterized protein Ago)
reference	Serganov et al. 'Nucleic 45 9149 2017
source	Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
experiment	X-ray (resolution=2.90, R-factor=0.218)
structural superfamily	Ribonuclease H-like;
sequence family	Piwi domain 508;
multimeric complexes	3hk2_AB 3hvr_AB
reference complex	4n41_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xpa_A interface=265,275,408,410,413,429,431,440,441,444,604,641, hlgktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlheelalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavgdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv
interface signature	LSMWRINHRNFF

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# IC=4.144 IC/col=0.518 n_of_columns=8

A |   0   0  24  24  21  24  33   0
C |   0   0  24  24  10  24  21   0
G |   0  96  24  24  44  24  21  96
T |  96   0  24  24  21  24  21   0

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updated Thu Sep 12 22:24:12 2024