interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'RED14' DNA SEQUENCE
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.44, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1puf_B 5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RRNNIR

Estimated binding specificities ?

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# IC=11.729 IC/col=1.066 n_of_columns=11 specificity:   
A |  88   0   0  96   0   8   8  96   0   8  72
C |   0   0   0   0   0   0   8   0   0   8   8
G |   8   0  96   0   0   0   8   0   0  72   8
T |   0  96   0   0  96  88  72   0  96   8   8
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updated Wed Jul 30 14:49:38 2025