interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'RED14' DNA SEQUENCE
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.44, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex4cyc_B 5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RRNNIR

Estimated binding specificities ?

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# IC=11.690 IC/col=1.063 n_of_columns=11 specificity:   
A |  11   9  96   0  76  96  96   0   0  96   0
C |  19  67   0   0   9   0   0   0  96   0   9
G |   9   9   0   0   2   0   0   0   0   0   1
T |  57  11   0  96   9   0   0  96   0   0  86
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updated Tue Jan 6 00:37:30 2026