interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'MAGENTA14' DNA SEQUENCE
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=3.03, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1puf_B 5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNRM/RRNNIR

Estimated binding specificities ?

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# IC=9.461 IC/col=0.946 n_of_columns=10 specificity:   
A |   0   0  96   0  74  10  96  23  24  96
C |   0   0   0   0   0  10   0  10  24   0
G |   0  96   0   0   0  10   0  10  24   0
T |  96   0   0  96  22  66   0  53  24   0
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updated Wed Jul 30 14:49:49 2025