interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'BLUE14' DNA SEQUENCE
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.90, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1puf_B 5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RNNR

Estimated binding specificities ?

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# IC=7.837 IC/col=0.980 n_of_columns=8 specificity:   
A |   0   8  69  61   0   0  96   0
C |   0  19   8   8   0  96   0   0
G |   0   8  11  10   0   0   0   0
T |  96  61   8  17  96   0   0  96
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updated Wed Jul 30 14:50:02 2025