interface graph thumbnail
legend  pdf

structure nameOCT4/SOX2:UTF1 STRUCTURE
referenceVahokoski et al. 'To ? ? ?
sourceMUS MUSCULUS
experimentX-ray (resolution=3.45, R-factor=?)
structural superfamilyHMG-box;lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex1o4x_B 8bx1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNFMRNSYR/QTSR

Estimated binding specificities ?

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# IC=11.171 IC/col=1.016 n_of_columns=11 specificity:   
A |   5  79   1   0   5   0   5  96   0   5   0
C |  73   7   0   0   5   0   7   0   0   7  96
G |  11   5   5   0  79   0   5   0   0  79   0
T |   7   5  90  96   7  96  79   0  96   5   0
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updated Thu Jun 25 15:51:42 2026