interface graph thumbnail
legend  pdf

structure nameOCT4/SOX2:UTF1 STRUCTURE
referenceVahokoski et al. 'To ? ? ?
sourceMUS MUSCULUS
experimentX-ray (resolution=3.45, R-factor=?)
structural superfamilyHMG-box;lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex1o4x_B 8bx1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNFMRNSYR/QTSR

Estimated binding specificities ?

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# IC=11.161 IC/col=1.015 n_of_columns=11 specificity:   
A |   0   7  96   0  80  96   5  96  90   6   5
C |   0  74   0   0   5   0  80   0   5   5  12
G |  96   5   0   0   5   0   5   0   0   5  74
T |   0  10   0  96   6   0   6   0   1  80   5
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updated Wed Jul 30 18:35:43 2025