interface graph thumbnail
legend  pdf

structure nameOCT4/SOX2:UTF1 STRUCTURE
referenceVahokoski et al. 'To ? ? ?
sourceMUS MUSCULUS
experimentX-ray (resolution=3.45, R-factor=?)
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex8bx1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNFMRNSYR/QTSR

Estimated binding specificities ?

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# IC=11.284 IC/col=1.026 n_of_columns=11 specificity:   
A |  13  84   0   0   5   0   5  96   0  11   0
C |  73   7   1   0   7   0   5   0   0   7  96
G |   5   5   5   0  79   0   5   0   0  73   0
T |   5   0  90  96   5  96  81   0  96   5   0
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updated Sat Dec 14 13:07:39 2024