interface graph thumbnail
legend  pdf

structure nameREF6 ZNF2-4-NAC004 COMPLEX
(Lysine-specific demethylase REF6)
referenceYao et al. 'Nat 10 2063 2019
sourceArabidopsis thaliana
experimentX-ray (resolution=2.15, R-factor=0.207)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureFYWWSEFVSDSR

Estimated binding specificities ?

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# IC=6.185 IC/col=1.031 n_of_columns=6 specificity:   
A |  38   0  96  19  96   0
C |  19  96   0   1   0   0
G |  20   0   0  76   0  96
T |  19   0   0   0   0   0
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updated Tue Dec 17 04:35:54 2024