interface graph thumbnail
legend  pdf

structure nameREF6 ZNF2-4-NAC004 COMPLEX
(Lysine-specific demethylase REF6)
referenceYao et al. 'Nat 10 2063 2019
sourceArabidopsis thaliana
experimentX-ray (resolution=2.15, R-factor=0.207)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes6jnn_AN
reference complex6jnm_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureFYWWSEFVSDSR

Estimated binding specificities ?

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# IC=5.105 IC/col=0.851 n_of_columns=6 specificity:   
A |   0   0   1   8  11   8
C |  96   0  87  11   8  11
G |   0   0   0   8  69   8
T |   0  96   8  69   8  69
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updated Thu Sep 12 23:51:57 2024