6p0u_ABEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX " FX(1-2)-2XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS
reference	Hancock et al. 'Nucleic 47 8874 2019
source	ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Putative DNA-binding domain;Homeodomain-like;
reference complex	1rh6_B 5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6p0u_A interface=71,72,76, sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn > 6p0u_B interface=61,70,71,75, dvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 6p0u_E interface=17,19,20,22,23,26,39, myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl > 6p0u_F interface=23,26,39, myltlqewnarqrrprsletvrRwvResrifpppvkdgReylfhesavkvd
interface signature	NRR/TNRR/SETRRRR/RRR

Estimated binding specificities ?

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# IC=12.763 IC/col=0.608 n_of_columns=21

specificity:

A |  86  24  24  24  24   0   0   4   7   1   9  24  24  24  24  94   0  13   9  13   0
C |   1  24  24  24  24   0   0   1   9  11   1  24  24  24  24   0  96  80   9  82  96
G |   1  24  24  24  24   0  96   1  79  12  11  24  24  24  24   1   0   3  67   1   0
T |   8  24  24  24  24  96   0  90   1  72  75  24  24  24  24   1   0   0  11   0   0

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updated Tue Sep 10 18:10:51 2024