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legend  pdf

structure nameSTRUCTURE OF LUXR WITH DNA (ACTIVATION)
(HTH-type transcriptional regulator LuxR)
referenceReverter et al. 'Nucleic 49 3274 2021
sourceVibrio alginolyticus
experimentX-ray (resolution=2.60, R-factor=0.222)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes7amn_AB 7amt_AB
reference complex7amn_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSATF

Estimated binding specificities ?

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# IC=5.927 IC/col=0.659 n_of_columns=9 specificity:   
A |  81   0  81  24   4   4  24   4  81
C |   7   0   7  24   4   4  24  84   4
G |   4   0   4  24   7  76  24   4   4
T |   4  96   4  24  81  12  24   4   7
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updated Mon Dec 18 19:42:54 2023