interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LUXR WITH DNA (ACTIVATION)
(HTH-type transcriptional regulator LuxR)
referenceReverter et al. 'Nucleic 49 3274 2021
sourceVibrio alginolyticus
experimentX-ray (resolution=2.60, R-factor=0.222)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes7amn_AB 7amt_AB
reference complex7amn_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSATF

Estimated binding specificities ?

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# IC=7.466 IC/col=0.830 n_of_columns=9 specificity:   
A |   0   0  16  14  96  24   0  96   7
C |   0   0  14  51   0  24   0   0   9
G |   7  96   7  17   0  24   0   0   7
T |  89   0  59  14   0  24  96   0  73
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updated Sat Aug 2 15:54:44 2025