interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LUXR WITH DNA (ACTIVATION)
(HTH-type transcriptional regulator LuxR)
referenceReverter et al. 'Nucleic 49 3274 2021
sourceVibrio alginolyticus
experimentX-ray (resolution=2.60, R-factor=0.222)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes7amn_AB 7amt_AB
reference complex7amn_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSATF

Estimated binding specificities ?

contactlogo
# IC=5.875 IC/col=0.653 n_of_columns=9 specificity:   
A |  81   0  80  24   6   5  24   5  80
C |   5   0   5  24   5   5  24  80   5
G |   5   0   6  24   0  76  24   5   6
T |   5  96   5  24  85  10  24   6   5
scan!

home
updated Tue Dec 17 08:44:08 2024