interface graph thumbnail
legend  pdf

structure nameCCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS NIDULANS CCCA DNA
referenceHuber et al. Structure 30 934 2022
experimentX-ray (resolution=3.40, R-factor=0.254)
structural superfamilyLeucine zipper domain;
sequence familyMinimal binding domain of Hap4 for bind; bZIP transcription factor;
multimeric complexes4g92_ABC 6y35_ABC 6y36_ABC 6y37_ABC 6y39_BCEFHI 7aw7_ABCDE 7aw9_ABCDE
redundant complexes6y39_C 4g92 6y35 6y36 6y37 7aw9
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signaturePRQQFR

Estimated binding specificities ?

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# IC=6.247 IC/col=0.892 n_of_columns=7 specificity:   
A |   7   0   0   7   7  96  73
C |   9   0   0   7   7   0   7
G |   7   0  96  73   9   0   9
T |  73  96   0   9  73   0   7
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Dendrogram of similar interfaces ?

matrix format

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updated Sat Sep 14 01:55:56 2024