7aw7_ABCDE : 3D-footprint complex

structure name	CCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS NIDULANS CCCA DNA
reference	Huber et al. Structure 30 934 2022
source	ASPERGILLUS NIDULANS FGSC A4
experiment	X-ray (resolution=3.40, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	7aw7_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7aw7_A interface=41,44,48,50,55,56, plyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHamrRpRgpggRFlt > 7aw7_B interface=11, mkeqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre > 7aw7_C interface= twanvnqglqGtardilttywqhvinhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr > 7aw7_D interface=14,16,30,35,38,39, vtskewiipprpkPgRkpatdtpptkrkaQnraaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdrsh > 7aw7_E interface=4,8,9,12,15,16, ptkRkaqNRaaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdr
interface signature	RHRRRF/A/G/PRQQFR/RNRQFR

Estimated binding specificities ?

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# IC=13.663 IC/col=0.594 n_of_columns=23

specificity:

A |   0  96  96   0   4  24  24  24  24  24  24  24  24  24   8   4  24   4   0  91   4   0  96
C |  96   0   0   4  71  24  24  24  24  24  24  24  24  24   4  10  24   8   0   0  78  96   0
G |   0   0   0   0   4  24  24  24  24  24  24  24  24  24   4  74  24   4   0   0   8   0   0
T |   0   0   0  92  17  24  24  24  24  24  24  24  24  24  80   8  24  80  96   5   6   0   0

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updated Sun Dec 15 02:39:35 2024