4g92_ABC : 3D-footprint complex

structure name	CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH DNA
reference	Hortschansky et al. Structure 20 1757 2012
source	ASPERGILLUS NIDULANS / EMERICELLA NIDULANS
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	7aw7_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4g92_A interface=42,45,49,51,56,57, splyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHamrRpRgpggRFltad > 4g92_B interface=11,26, mkeqdrwlpiAnvarimklalpenaKiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre > 4g92_C interface= gtwanvnqglQgtardilttywqhvInhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivp
interface signature	RHRRRF/AK/QI

Estimated binding specificities ?

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# IC=7.364 IC/col=0.614 n_of_columns=12

specificity:

A |   2   0  96  96   4   4  56  24  24  24  24   4
C |  86  96   0   0   6  68  18  24  24  24  24   4
G |   4   0   0   0   4   4   9  24  24  24  24   4
T |   4   0   0   0  82  20  13  24  24  24  24  84

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updated Fri Dec 13 19:42:45 2024