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structure nameCRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO A DIRECT-REPEAT DNA ELEMENT
(KORA domain-containing protein)
referenceFernandez-Lopez et al. 'To ? ? ?
sourceEscherichia coli K-12
experimentX-ray (resolution=2.80, R-factor=0.234)
structural superfamilySigma3 and sigma4 domains of RNA polymerase sigma factors;
multimeric complexes7bca_AB 7bcb_AB
redundant complexes7bcb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRQRS

Estimated binding specificities ?

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# IC=4.203 IC/col=0.600 n_of_columns=7 specificity:   
A |  10   0   4  96  34  14  52
C |  10   0  81   0  20  16  14
G |  63   0   4   0  20  14  16
T |  13  96   7   0  22  52  14
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updated Sat Sep 14 01:57:25 2024