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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO IR3 DNA
(KORA domain-containing protein)
referenceFernandez-Lopez et al. 'To ? ? ?
sourceEscherichia coli K-12
experimentX-ray (resolution=2.80, R-factor=0.255)
structural superfamilySigma3 and sigma4 domains of RNA polymerase sigma factors;
multimeric complexes7bca_AB 7bcb_AB
reference complex7bca_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRQ

Estimated binding specificities ?

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# IC=2.613 IC/col=0.653 n_of_columns=4 specificity:   
A |   5   9   5   1
C |   6   8   5  91
G |   7  69  42   1
T |  78  10  44   3
scan!

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updated Fri Sep 13 03:41:09 2024