7m1x_C : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CONTAINING MOUSE HISTONE VARIANT H2A.Z
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1f66_ABCDEFGH 3wa9_ABCDEFGH 3waa_ABCDEFGH 5b33_ABCDEFGH 5z30_ABCDEFGH 6jou_ABCDEFGH 7m1x_ABCDEFGH 8jhf_ABCDEFGH 8t9f_ABCDEFGH 8thu_ABCDEFGH 9b3p_ABCDEFGH
redundant complexes	1f66_C 3waa_C 6jou_G 3wa9 5b33 5z30 7yrd 7yrg 8jhf 8t9f 8thu 9b3p
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7m1x_C interface=30, avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli

  
  RT--           +-----------------------------8u14_G    
               +-1 
  RG--       +-2 +-----------------------------8txv_G    
             ! ! 
  RGRG     --3 +-----------------------------8kcb_A    
             ! 
  RT--       +-----------------------------8smw_G

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updated Sat Sep 14 03:13:49 2024