7m1x_C : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CONTAINING MOUSE HISTONE VARIANT H2A.Z
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1f66_ABCDEFGH 3wa9_ABCDEFGH 3waa_ABCDEFGH 5b33_ABCDEFGH 5z30_ABCDEFGH 6jou_ABCDEFGH 7m1x_ABCDEFGH 8t9f_ABCDEFGH 8thu_ABCDEFGH
redundant complexes	1f66_C 3waa_C 6jou_G 3wa9 5b33 5z30 8t9f 8thu
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7m1x_C interface=30, avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli

  
  --RA          +--------------------------1kx5_G    
                !  
  --RT          !                           +7lyb_G    
                !                        +--1 
  --RC          !                        !  +6qld_f    
                !                 +------4 
  --RA          !                 !      !  +7xsx_a    
             +-11             +---5      +--2 
  LTRC       !  !             !   !         +3kwq_E    
             !  !  +----------6   ! 
  LARG       !  !  !          !   +---------7unc_a    
             !  !  !          ! 
  LC--       !  !  !          +-------------8bvw_e    
             !  !  !  
  --RG       !  +-10                        +7uv9_E    
           -12     !         +--------------3 
  --RT       !     !    +----7              +8g57_E    
             !     !    !    ! 
  --RT       !     ! +--8    +--------------8cww_A    
             !     ! !  ! 
  LCRT       !     +-9  +-------------------8byq_e    
             !       ! 
  LTRC       !       +----------------------6jm9_A    
             !  
  --RG       +-----------------------------7yqk_E

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updated Tue Dec 19 19:00:36 2023