interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF PACII_M1M2S-DNA-SAH COMPLEX
referenceZhu et al.
experimentX-ray (resolution=2.40, R-factor=0.192)
structural superfamilyDNA methylase specificity domain;
sequence familyType I restriction modification DNA speci;
multimeric complexes7vru_ABC 7vs4_ABC
redundant complexes7vs4
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRRHLSKSWRVASNQAARPN

Estimated binding specificities ?

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# IC=12.429 IC/col=0.777 n_of_columns=16 specificity:   
A |  54  24  24   0   0   0   0  24  24  24  13  96   0   0   0   0
C |  16  24  24  96  96  96   0  24  24  24  16   0   0   0   0  96
G |  13  24  24   0   0   0  96  24  24  24  13   0   0   0  96   0
T |  13  24  24   0   0   0   0  24  24  24  54   0  96  96   0   0
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updated Sun Aug 3 20:50:50 2025