8c84_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MADS-BOX/MEF2D N-TERMINAL DOMAIN COMPLEX
reference	Chinellato et al. J.Mol.Biol. 436 168541 2024
source	Homo sapiens
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	SRF-like;
reference complex	8q9n_B 8q9p_B 8q9q_A 8q9r_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8c84_A interface=2,22, gRkkiqiqritdernrqvtftKrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkk > 8c84_B interface=2,22,93, gRkkiqiqritdernrqvtftKrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkgfN
interface signature	RK/RKN

Estimated binding specificities ?

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# IC=5.766 IC/col=0.577 n_of_columns=10

specificity:

A |  16   0  96  24  24  24  24  13  96  96
C |  54   0   0  24  24  24  24  16   0   0
G |  13   0   0  24  24  24  24  13   0   0
T |  13  96   0  24  24  24  24  54   0   0

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updated Sun Dec 15 22:55:07 2024