interface graph thumbnail
legend  pdf

structure nameHUMAN PU.1 ETS-DOMAIN BOUND TO D(AATAAGCGGAAGTGGG) ACETATE FREE AT PH 5.4
(Transcription factor PU.1)
referenceTerrell et al. 'Cell 42 112671 2023
sourceHomo sapiens
experimentX-ray (resolution=1.32, R-factor=0.149)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
multimeric complexes8ek8_EF
reference complex8ee9_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQKRARN

Estimated binding specificities ?

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# IC=4.250 IC/col=0.850 n_of_columns=5 specificity:   
A |  12  12   0   0  12
C |  12  12  96  96   0
G |  12  12   0   0  84
T |  60  60   0   0   0
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updated Fri Sep 13 10:31:13 2024