interface graph thumbnail
legend  pdf

structure nameHUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGAGGAATGGGG)
(Transcription factor PU.1)
referenceTerrell et al. 'Cell 42 112671 2023
sourceHomo sapiens
experimentX-ray (resolution=1.39, R-factor=0.144)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
multimeric complexes8ek8_EF
reference complex8ee9_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQKRARN

Estimated binding specificities ?

readout + contactlogo
# IC=4.250 IC/col=0.850 n_of_columns=5 specificity:   
A |  12  12   0   0  12
C |  12  12  96  96   0
G |  12  12   0   0   0
T |  60  60   0   0  84
scan!

home
updated Fri Sep 13 10:44:42 2024