8ekj_F : 3D-footprint complex

structure name	HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAATGGAAGTGGG) (Transcription factor PU.1)
reference	Terrell et al. 'Cell 42 112671 2023
source	Homo sapiens
experiment	X-ray (resolution=1.54, R-factor=0.166)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Etsdomain;
reference complex	8ee9_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ekj_F interface=58,59,62,63,65,66, kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr
interface signature	QKRARN

Estimated binding specificities ?

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# IC=3.001 IC/col=0.214 n_of_columns=14

specificity:

A |  24  24  24  27  15   0   6  81  31  21  24  24  24  24
C |  24  24  24  22  15   0   6   7  21  21  24  24  24  24
G |  24  24  24  22  15  96  78   4  23  33  24  24  24  24
T |  24  24  24  25  51   0   6   4  21  21  24  24  24  24

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updated Tue Dec 19 03:08:48 2023