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structure nameCRYSTAL STRUCTURE OF C/EBPALPHA BZIP DOMAIN BOUND TO A HIGH AFFINITY DNA
(CCAATenhancer-binding protein alpha)
referenceChen et al. J.Biol.Chem. 300 105776 2024
sourceHomo sapiens
experimentX-ray (resolution=2.06, R-factor=0.231)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper;
multimeric complexes1nwq_AC 8k8c_AB
redundant complexes1nwq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=5.807 IC/col=0.968 n_of_columns=6 specificity:   
A |  57   0   0  96   0  16
C |  13   0   0   0  96  13
G |  13   0   0   0   0  54
T |  13  96  96   0   0  13
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updated Sat Sep 14 11:21:01 2024