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structure nameCRYSTAL STRUCTURE OF C/EBPALPHA BZIP DOMAIN BOUND TO A HIGH AFFINITY DNA
(CCAATenhancer-binding protein alpha)
referenceChen et al. J.Biol.Chem. 300 105776 2024
sourceHomo sapiens
experimentX-ray (resolution=2.06, R-factor=0.231)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper;
multimeric complexes1nwq_AC 8k8c_AB
redundant complexes1nwq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=5.766 IC/col=0.961 n_of_columns=6 specificity:   
A |  13   0   0  96  96  13
C |  54   0   0   0   0  16
G |  13  96   0   0   0  13
T |  16   0  96   0   0  54
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updated Wed Dec 18 18:49:33 2024