Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameRNA POLYMERASE II CORE INITIALLY TRANSCRIBING COMPLEX WITH AN ORDERED RNA OF 10 NT
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;
reference complex5iy6_M
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRPTAR/K//QRSRVT/NVFALFVTNVFPLFVT/K/

Estimated binding specificities ?

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# IC=12.934 IC/col=0.497 n_of_columns=26 specificity:   
A |   8  24   0   0  16  24  24  24  24  24  24  24  24  24  24   0   0  24   0   0  96   0  96  24  24  16
C |   8  24  96   0  16  24  24  24  24  24  24  24  24  24  24  96   0  24   0   0   0   0   0  24  24  48
G |   8  24   0  96  56  24  24  24  24  24  24  24  24  24  24   0   0  24   0   0   0   0   0  24  24  16
T |  72  24   0   0   8  24  24  24  24  24  24  24  24  24  24   0  96  24  96  96   0  96   0  24  24  16
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updated Mon Dec 16 09:48:00 2024