Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameHUMAN HOLO-PIC IN THE CLOSED STATE
experimentNMR
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes5iy6_AMPTV 5iy7_ABEMNPTV 5iy8_ABEMNPTV 5iy9_ABEMNPTV 5iya_AMPT 5iyb_ABEMNPT 5iyc_ABEMNPT 5iyd_ABEMNPT 6mzm_ABTW 6o9l_7AMNPT 6o9l_ES 7lbm_AMOPTW 7lbm_BEQ 7nvr_7AEMORU 7nvs_AMORU 7nvs_BE 7nvt_AMORU 7nvu_ABEMORU 7nvy_7AMORU 7nvy_BE 7nvz_7AMORU 7nw0_7ABEMORU 7zwd_AMORUbc 7zwd_BE 7zx7_AMORUbc 7zx7_BE 8gxq_ABCDEFGHPQs 8gxs_ABCDEFGHPQ 8iue_34BEPUVW 8iuh_1I 8iuh_OQ
redundant complexes5iy7_P 5iy9_P 7nvu_O 7zx8_O 5iy8 5iya 5iyb 5iyc 5iyd 6mzm 6o9l 7lbm 7nvr 7nvs 7nvt 7nvy 7nvz 7nw0 7zwd 7zx7 8bvw 8byq 8bz1 8gxq 8gxs 8ity 8iue 8iuh
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFTNVFPLFVT

Estimated binding specificities ?

contactlogo
# IC=6.300 IC/col=0.788 n_of_columns=8 specificity:   
A |   0  22  24   0   0  81   0  51
C |  96   7  24   0   0   7   0   9
G |   0  16  24   8   0   8   0  22
T |   0  51  24  88  96   0  96  14
scan!

home
updated Tue Dec 19 10:42:30 2023