Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameRNA POLYMERASE II CORE INITIALLY TRANSCRIBING COMPLEX WITH AN ORDERED RNA OF 12 NT
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;
reference complex5iy6_M
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQPTARH/YSAI//RT/NVFALFVTNVFPLFVT/K/

Estimated binding specificities ?

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# IC=12.530 IC/col=0.545 n_of_columns=23 specificity:   
A |   0  96   7  96  96  79  96   0  24   0  24  24  24  24  24  24  24  24  11   0  24  24  12
C |   0   0   5   0   0   5   0   0  24   5  24  24  24  24  24  24  24  24  69   0  24  24  11
G |   0   0   5   0   0   7   0  96  24  86  24  24  24  24  24  24  24  24   5  96  24  24  11
T |  96   0  79   0   0   5   0   0  24   5  24  24  24  24  24  24  24  24  11   0  24  24  62
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updated Mon Dec 16 10:05:41 2024