interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS
(PROTEIN ENGRAILED HOMEODOMAIN)
referenceMartin-Blanco et al.
sourceDrosophila melanogaster
experimentX-ray (resolution=2.80, R-factor=0.225)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRIQNK

Estimated binding specificities ?

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# IC=5.766 IC/col=0.824 n_of_columns=7 specificity:   
A |  16  24  54   0   0  96   0
C |  13  24  16   0   0   0  96
G |  13  24  13   0   0   0   0
T |  54  24  13  96  96   0   0
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updated Mon Dec 16 17:53:27 2024