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structure nameCRYSTAL STRUCTURE OF THERMUS AQUATICS RNA POLYMERASE SIGMAA SUBUNIT REGION 4 BOUND TO-35 ELEMENT DNA
(sigma factor sigA)
referenceTrester-Zedlitz et al. Mol.Cell 9 527 2002
sourceThermus aquaticus
experimentX-ray (resolution=2.40, R-factor=0.255)
structural superfamilySigma3 and sigma4 domains of RNA polymerase sigma factors;
sequence familySigma70, region 4;
multimeric complexes1rio_ABH 5i2d_CDFGH 5i2d_NOQRS
reference complex1rio_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLTRERRQ

Estimated binding specificities ?

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# IC=6.292 IC/col=0.899 n_of_columns=7 specificity:   
A |   7   0   9   0  73  96   9
C |   7   0   7  96   7   0   7
G |   7  96   7   0   9   0  73
T |  75   0  73   0   7   0   7
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updated Thu Jan 8 18:10:39 2026