interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE COOPERATIVE EXCISIONASE (XIS)-DNA COMPLEX REVEALS A MICRONUCLEOPROTEIN FILAMENT
(EXCISIONASE)
referencePapagiannis et al. Proc.Natl.Acad.Sci.Usa 104 2109 2007
sourceENTEROBACTERIA PHAGE LAMBDA
experimentX-ray (resolution=2.60, R-factor=0.201)
structural superfamilyPutative DNA-binding domain;
sequence familyExcisionaselike protein;
multimeric complexes1rh6_AB 2og0_AB 6p0u_ABEF
reference complex1rh6_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureETRRRR

Estimated binding specificities ?

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# IC=5.049 IC/col=0.459 n_of_columns=11 specificity:   
A |   0  24  24  24   0  24  96  24  21  85  21
C |   0  24  24  24   0  24   0  24  16   0  16
G |   5  24  24  24  96  24   0  24  22   6   5
T |  91  24  24  24   0  24   0  24  37   5  54
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updated Thu Sep 12 16:12:41 2024