interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE COOPERATIVE EXCISIONASE (XIS)-DNA COMPLEX REVEALS A MICRONUCLEOPROTEIN FILAMENT
(EXCISIONASE)
referencePapagiannis et al. Proc.Natl.Acad.Sci.Usa 104 2109 2007
sourceENTEROBACTERIA PHAGE LAMBDA
experimentX-ray (resolution=2.60, R-factor=0.201)
structural superfamilyPutative DNA-binding domain;
sequence familyExcisionaselike protein;
multimeric complexes1rh6_AB 2og0_AB 6p0u_ABEF
reference complex1rh6_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureETRRRR

Estimated binding specificities ?

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# IC=4.735 IC/col=0.430 n_of_columns=11 specificity:   
A |   4  24  24  24   0  24  96  24  18  82  18
C |   4  24  24  24   0  24   0  24  13   6   4
G |   6  24  24  24  96  24   0  24  18   4  15
T |  82  24  24  24   0  24   0  24  47   4  59
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updated Sat Aug 2 02:43:05 2025