1trr_A : 3D-footprint complex

structure name	TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX (PROTEIN TRP REPRESSOR)
reference	Lawson et al.
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.40, R-factor=0.241)
structural superfamily	TrpR-like;
sequence family	Trp repressor protein;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1trr_A interface=1,67,68,78,79,80,82,83, AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll
interface signature	AQRIATTR

Estimated binding specificities ?

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# IC=5.929 IC/col=0.539 n_of_columns=11

specificity:

A |   0   0   0  48   6  24  60  24  24  24  12
C |  96   0   0  18  90  24  18  24  24  24  54
G |   0  96   0  18   0  24  18  24  24  24  18
T |   0   0  96  12   0  24   0  24  24  24  12

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updated Mon Dec 16 18:57:21 2024