interface graph thumbnail
legend  pdf

structure nameQ138F HINCII BOUND TO COGNATE DNA GTCGAC AND CA2+
(Type II restriction enzyme HincII)
referenceBitinaite et al. J.Biol.Chem. 281 23852 2006
sourceHaemophilus influenzae
experimentX-ray (resolution=2.50, R-factor=0.190)
structural superfamilyRestriction endonuclease-like;
multimeric complexes1kc6_CD 2gig_AB 2gih_AB 2gii_AB 2gij_AB 3e3y_AB 3e40_AB 3e41_AB 3e42_AB 3e43_AB 3e45_AB 3ebc_AB
reference complex2gig_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQNAFPNYNAAAQQ

Estimated binding specificities ?

contactlogo
# IC=4.991 IC/col=0.832 n_of_columns=6 specificity:   
A |   0  17   0   8   8  69
C |   0   0   0  72   8  11
G |  96  78   0   8  69   8
T |   0   1  96   8  11   8
scan!

home
updated Thu Sep 12 16:08:18 2024