interface graph thumbnail
legend  pdf

structure nameQ138F HINCII BOUND TO COGNATE DNA GTTAAC AND CA2+
(Type II restriction enzyme HincII)
referenceHorton et al. J.Biol.Chem. 281 23852 2006
sourceHaemophilus influenzae
experimentX-ray (resolution=1.93, R-factor=0.238)
structural superfamilyRestriction endonuclease-like;
multimeric complexes1kc6_CD 2gig_AB 2gih_AB 2gii_AB 2gij_AB 3e3y_AB 3e40_AB 3e41_AB 3e42_AB 3e43_AB 3e45_AB 3ebc_AB
reference complex2gig_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQNSFPNYNAAAQQ

Estimated binding specificities ?

readout + contactlogo
# IC=7.099 IC/col=1.014 n_of_columns=7 specificity:   
A |   0   0   0  16  96  96  13
C |   0   0   0  13   0   0  54
G |  96  96   0  13   0   0  13
T |   0   0  96  54   0   0  16
scan!

home
updated Thu Sep 12 16:08:33 2024