Estimated binding specificities ?

structure nameCRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH THE COMPLETE RIGHT END 35-MER DNA AND MANGANESE
(TRANSPOSASE ORFA)
referenceRonning et al. 'Cell(Cambridge,Mass.)' 132 208 2008
sourceHELICOBACTER PYLORI
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyTransposase IS200-like;
sequence familyTransposase IS200 like;
multimeric complexes2a6o_AB 2vhg_AB 2vic_AB 2vih_AB 2vju_AB
reference complex2vih_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
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# IC=3.753 IC/col=0.179 n_of_columns=21 specificity:   
A |  81  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  45   0   4   4
C |   4  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16   0   7   4
G |   4  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  19   0  81  81
T |   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16  96   4   7
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updated Sun Jun 28 06:17:20 2026