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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C
(Repressor protein C2)
referenceKoudelka et al. J.Mol.Biol. 396 1145 2010
sourceEnterobacteria phage P22
experimentX-ray (resolution=1.67, R-factor=0.198)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSNVASQRET

Estimated binding specificities ?

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# IC=7.366 IC/col=0.921 n_of_columns=8 specificity:   
A |   7  79   7   5   5  96  96   5
C |   5   5   5   7   5   0   0   0
G |   5   5   5   5   5   0   0  90
T |  79   7  79  79  81   0   0   1
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updated Mon Dec 16 21:07:54 2024