interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C IN THE PRESENCE OF RB+
(Repressor protein C2)
referenceKoudelka et al. J.Mol.Biol. 396 1145 2010
sourceEnterobacteria phage P22
experimentX-ray (resolution=2.10, R-factor=0.183)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSNVASQRET

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   9  11  96  96  67
C |   9   9   0   0   9
G |   9   9   0   0  11
T |  69  67   0   0   9
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updated Mon Dec 16 21:08:09 2024